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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015804525.1_cds_XP_016489195.1_7953
CDS Infomation

[gene=LOC107809106] [db_xref=GeneID:107809106] [protein=tocopherol O-methyltransferase, chloroplastic-like isoform X2] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016489195.1] [location=complement(join(10041,10665..10767,10855..10957,11080..11283,11375..11479,11965..>12126))] [gbkey=CDS]
Sequence

GCAAAGAAACCAAGGTCCATAGTTGATGTTGGATGTGGGATAGGAGGCAGTTCTAGGTAC
CTTGCAAAGAAATATGGCGCTACAGCTCAAGGCATCACGTTGAGTCCTGTACAAGCCGAG
AGGGCTCAAGCTCTTGCTGCTGCTCAAGGATTAGGCGATAAGGCTTCTTTTCAAGTTGCA
GACGCCTTGAATCAGCCATTTCCAGATGGGCAATTTGACTTGGTTTGGTCCATGGAGAGT
GGAGAACACATGCCGGACAAACAAAAGTTTGTTGGCGAATTAGCTCGAGTGGCTGCACCA
GGAGGCACAATCATACTTGTGACATGGTGCCACAGGGATCTTTCCCCTTCAGAGGAATCT
CTGCTTCCAGAGGAGAAAGAGTTGTTAAATAAGATATGTAAATCCTTCTATCTTCCTGCA
TGGTGTTCCACTGCTGATTATGTGAAGTTACTTCAATCTAACTCTCTTCGGGATATCAAG
GCAGCAGATTGGTCTGAGAATGTCGCTCCATTTTGGCCAGCAGTTATAAAATCTGCACTG
ACATGGAAGGGCTTCACATCAATCCTACGCAGTGGATGGAAGACAATCAAAGCTGCACTT
GCAATGCCACTGATGATTGAAGGATACAAGAAGGGTCTGATCAAATTTGCCATCATCACA
TGTCGTAAACCTGAATAG

Peptide Sequence

PEP ID

XP_016489195.1
PEP Infomation

PREDICTED: tocopherol O-methyltransferase, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MSSTCYSASSIQSLNPTCPSSLIFTLHKPQLLQIHSIKETKRTRTVRTYNSNTRTRRRMT
SVAAMNAVSTPEVDVQNQQELKKGIAELYDESSGIWEDIWGDHMHHGFYEPQSSVSLSDH
RAAQIRMIEEALRFASVSDDPAKKPRSIVDVGCGIGGSSRYLAKKYGATAQGITLSPVQA
ERAQALAAAQGLGDKASFQVADALNQPFPDGQFDLVWSMESGEHMPDKQKFVGELARVAA
PGGTIILVTWCHRDLSPSEESLLPEEKELLNKICKSFYLPAWCSTADYVKLLQSNSLRDI
KAADWSENVAPFWPAVIKSALTWKGFTSILRSGWKTIKAALAMPLMIEGYKKGLIKFAII
TCRKPE

Transcript Sequence

Gene sequence data has not been registered.